Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs72923272 chr11:62166832 G/A 1.89E-11 169 22.57 26.9 4.33 KM Plot
UCEC rs72958863 chr2:180808144 C/T 0.000131 173 22.57 20.93 13.63 KM Plot
UCEC rs72960660 chr2:180832482 A/G 0.000131 173 22.57 20.93 13.63 KM Plot
UCEC rs72960664 chr2:180832672 C/T 0.000131 173 22.57 20.93 13.63 KM Plot
UCEC rs72974833 chr11:73375104 A/C 2.38E-7 173 22.2 30.07 4.33 KM Plot
UCEC rs72984413 chr19:310283 A/G 2.78E-6 168 24.02 19.1 8.3 KM Plot
UCEC rs72984416 chr19:310369 C/T 2.78E-6 168 24.02 19.1 8.3 KM Plot
UCEC rs72984427 chr19:311708 A/G 3.15E-6 167 23.97 19.1 8.3 KM Plot
UCEC rs72984430 chr19:313302 T/A 9.05E-7 168 24.63 18.82 8.3 KM Plot
UCEC rs72984434 chr19:314108 G/A 2.17E-6 170 24.35 19.1 8.3 KM Plot
UCEC rs72984437 chr19:314176 C/G 2.46E-6 169 24.07 19.1 8.3 KM Plot
UCEC rs72984441 chr19:314933 G/A 1.25E-5 171 24.35 19.1 11.6 KM Plot
UCEC rs72984443 chr19:315552 C/T 1.2E-5 172 24.07 19.1 11.6 KM Plot
UCEC rs72984446 chr19:315919 A/G 1.2E-5 172 24.07 19.1 11.6 KM Plot
UCEC rs72984447 chr19:315954 G/A 1.2E-5 172 24.07 19.1 11.6 KM Plot